Oceanography The Official Magazine of
The Oceanography Society
Volume 24 Issue 02

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Volume 24, No. 2
Pages 166 - 173

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OBIS-USA: A Data-Sharing Legacy of the Census of Marine Life

By George R. Sedberry , Daphne G. Fautin, Michael Feldman , Mark D. Fornwall, Philip Goldstein, and Robert P. Guralnick 
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Article Abstract

The United States Geological Survey’s Biological Informatics Program hosts OBIS-USA, the US node of the Ocean Biogeographic Information System (OBIS). OBIS-USA gathers, coordinates, applies standard formats to, and makes widely available data on biological collections in marine waters of the United States and other areas where US investigators have collected data and, in some instances, specimens. OBIS-USA delivers its data to OBIS international, which then delivers its data to the Global Biodiversity Information Facility (GBIF) and other Web portals for marine biodiversity data. OBIS-USA currently has 145 data sets from 36 participants, representing over 6.5 million occurrence records of over 83,000 taxa from more than 888,000 locations. OBIS-USA, a legacy of the decade-long (2001–2010) international collaborative Census of Marine Life enterprise, continues to add data, including those from ongoing Census projects. Among the many challenges in creating OBIS, including OBIS-USA, were developing a community of trust and shared value among data providers, and demonstrating to providers the value of making their data accessible to others. Challenges also posed by the diversity of data sets relevant to marine biodiversity stored on thousands of computers, in a variety of formats, not all widely accessible, have been met in OBIS-USA by implementing a uniform standard and publishing platform that is easily accessible to a broad range of users.

Citation

Sedberry, G.R., D.G. Fautin, M. Feldman, M.D. Fornwall, P. Goldstein, and R.P. Guralnick. 2011. OBIS-USA: A data-sharing legacy of the Census of Marine Life. Oceanography 24(2):166–173, https://doi.org/10.5670/oceanog.2011.36.

References
    Bjorndal, K.A., B.W. Bowen, M. Chaloupka, L.B. Crowder, S.S. Heppell, C.M. Jones, M.E. Lutcavage, D. Policansky, A.R. Solow, and B.E. Witherington. 2011. Better science needed for restoration in the Gulf of Mexico. Science 331(6017):537–538. [CrossRef]
  1. Collette, B.B., and M. Vecchione. 1995. Interactions between fisheries and systematics. Fisheries 20(1):20–25. [CrossRef]
  2. Constable, H., R. Guralnick, J. Wieczorek, C. Spencer, A.T. Peterson, and the VertNet Steering Committee. 2010. VertNet: A new model for biodiversity data sharing. PloS Biology 8(2):e1000309. [CrossRef]
  3. Costello, M.J., M. Coll, R. Danovaro, P. Halpin, H. Ojaveer, and P. Miloslavich. 2010. A census of marine biodiversity knowledge, resources, and future challenges. PloS ONE 5(8):e12110. [CrossRef]
  4. Fornwall, M.D. 2000. Planning for OBIS: Examining relationships with existing national and international biodiversity information systems. Oceanography 13(3):31–38. [pdf]
  5. Grassle, J.F. 2000. The Ocean Biogeographic Information System (OBIS): An on-line, worldwide atlas for accessing, modeling and mapping marine biological data in a multidimensional geographic context. Oceanography 13(3):5–7. [pdf]
  6. Mora, C., D.P. Tittensor, and R.A. Myers. 2008. The completeness of taxonomic inventories for describing the global diversity and distribution of marine fishes. Proceedings of the Royal Society B–Biological Sciences 275:149–155. [CrossRef]
  7. National Research Council. 1993. A Biological Survey for the Nation. Committee on the Formation of the National Biological Survey, National Academy Press, Washington, DC, 205 pp.
  8. Tittensor, D.P., C. Mora, W. Jetz, H.K. Lotze, D. Ricard, E. Vanden Berghe, and B. Worm. 2010. Global patterns and predictors of marine biodiversity across taxa. Nature 466:1,098–1,103. [CrossRef]
  9. Yarincik, K., and R. O’Dor. 2005. The Census of Marine Life: Goals, scope and strategy. Scientia Marina (Barcelona) 69(suppl. 1):201–208.
Copyright & Usage

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